PART Ⅰ ANALYZING DNA, RNA, AND PROTEIN SEQCESUEN IN DATABASES 3
1Introduction, 3
2Access to Sequence Data and Literature Information, 13
3 Pairwise Sequence Alignment, 47
4 Basic Local Alignment Search Tool （BLAST）, 101
5Advanced Database Searching, 141
6 Multiple Sequence Alignment, 179
7Molecular Phylogeny and Evolution, 215
PART Ⅱ GENOMEWIDE ANALYSIS OF RNA AND PROTEIN 279
8 Bioinformatic Approaches to Ribonucleic Acid （RNA）, 279
9 Gene Expression: Microarray Data Analysis, 331
10 Protein Analysis and Proteomics, 379
11 Protein Structure, 421
12 Functional Genomics, 461
PART Ⅲ GENOME ANALYSIS 517
13 Completed Genomes, 517
14 Completed Genomes: Viruses, 567
15 Completed Genomes: Bacteria and Archaea, 597
16 The Eukaryotic Chromosome, 639
17 Eukaryotic Genomes: Fungi, 697
18 Eukaryotic Genomes: From Parasites to Primates, 729
19 Human Genome, 791
20 Human Disease, 839
Glossary, 891
Answers to Self-Test Quizzes, 909
Author Index, 911
Subject Index, 913